PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rsa1.0_08409.1_g00001.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
Family bZIP
Protein Properties Length: 159aa    MW: 17792.9 Da    PI: 9.9025
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rsa1.0_08409.1_g00001.1genomeRGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_157.82.4e-1856118163
                              XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                   bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                              e+e+kr+rrkq NReAA rsR+RK+ae +eL++  ++L aeN +L+ e+++lk + ++l+se+
  Rsa1.0_08409.1_g00001.1  56 EREVKRQRRKQTNREAAERSRLRKQAEFDELAKHTEVLNAENASLRAEMNRLKRQREELTSEN 118
                              799**********************************************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1706.8E-1352115No hitNo description
PfamPF001704.8E-1656118IPR004827Basic-leucine zipper domain
SMARTSM003382.0E-1456120IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.86358121IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.33E-1059115No hitNo description
CDDcd147027.64E-1461110No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    Send to blast
SESGGSANGP RNGSAGSSTP LPPVSQNMPV MPKTAAGAPT SAAPIPGMHR KVYQDEREVK  60
RQRRKQTNRE AAERSRLRKQ AEFDELAKHT EVLNAENASL RAEMNRLKRQ REELTSENNS  120
LKVQLLSFPP LEGINIKMEK DDQEPDTYQT VFTETKFVM
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_013734292.11e-70PREDICTED: transcription factor HBP-1a-like isoform X1
RefseqXP_013734293.11e-70PREDICTED: transcription factor HBP-1a-like isoform X1
RefseqXP_013734294.11e-70PREDICTED: transcription factor HBP-1a-like isoform X2
SwissprotQ501B25e-57BZP16_ARATH; bZIP transcription factor 16
TrEMBLM4E2L11e-69M4E2L1_BRARP; Uncharacterized protein
STRINGBra023012.1-P3e-69(Brassica rapa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM37012557
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.13e-58basic region/leucine zipper transcription factor 16